FAIRness of Alliance of Genome Resources
projectFAIR evaluation of the repositories in the Alliance of Genome Resources
Tags: DCPPC
URL(s):
View Associations View AnalyticsProject Assessments (166)
| Assessment | Metrics | Date | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Target | Rubric | The tool has a unique name and an informative description. | The tool can be freely downloaded or accessed from a webpage. | The tool utilizes a community-accepted ontology. | Tutorials for the tool are available on the tools homepage. | Source code is shared in a public repository and is documented. | Previous versions of the tool are made available. | Contact information is provided for the creator(s) of the tool and information describing how to cite the tool is provided. | The tool can be accessed programmatically through an API and follows community standards for open APIs. | Licensing information is provided on the tools homepage. | ||
| The Rat Genome Database: Map Report | The FAIRshake tool rubric |
|
yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | Sep 4, 2018 |
| The Rat Genome Database: Genome Information | The FAIRshake tool rubric |
|
nobut (0.25) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | no (0.00) | no (0.00) | Sep 4, 2018 |
| FlyBase: Gbrowse | The FAIRshake tool rubric |
|
yesbut (0.75) | yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | no (0.00) | yesbut (0.75) | Sep 4, 2018 |
| The Rat Genome Database: Reference Search | The FAIRshake tool rubric |
|
yesbut (0.75) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | Sep 4, 2018 |
| FlyBase: Jbrowse | The FAIRshake tool rubric |
|
yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | no (0.00) | yesbut (0.75) | Sep 4, 2018 |
| The Rat Genome Database: RGD Sequence Query Form | The FAIRshake tool rubric |
|
yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | Sep 4, 2018 |
| FlyBase: Feature Mapper | The FAIRshake tool rubric |
|
yesbut (0.75) | yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | no (0.00) | yesbut (0.75) | Sep 4, 2018 |
| FlyBase: Chromosome Maps | The FAIRshake tool rubric |
|
yesbut (0.75) | yes (1.00) | yesbut (0.75) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | no (0.00) | yesbut (0.75) | Sep 4, 2018 |
| Mouse Genome Informatics: Genes & Markers Query | The FAIRshake tool rubric |
|
yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yesbut (0.75) | yesbut (0.75) | Sep 4, 2018 |
| Mouse Genome Informatics: Batch Query | The FAIRshake tool rubric |
|
yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | yesbut (0.75) | yesbut (0.75) | Sep 4, 2018 |
| Mouse Genome Informatics: Mouse Genome Browser | The FAIRshake tool rubric |
|
yesbut (0.75) | yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yesbut (0.75) | yesbut (0.75) | Sep 4, 2018 |
| MouseMine | The FAIRshake tool rubric |
|
yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yesbut (0.75) | yesbut (0.75) | Sep 4, 2018 |
| Mouse Genome Informatics: Phenotypes, Alleles & Diseases Query | The FAIRshake tool rubric |
|
yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yesbut (0.75) | yesbut (0.75) | Sep 4, 2018 |
| Mouse Genome Informatics: Mammalian Phenotype (MP) Browser | The FAIRshake tool rubric |
|
yesbut (0.75) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | yesbut (0.75) | yesbut (0.75) | Sep 4, 2018 |
| Mouse Genome Informatics: Disease Ontology Browser | The FAIRshake tool rubric |
|
no (0.00) | yes (1.00) | yes (1.00) | yesbut (0.75) | no (0.00) | no (0.00) | yes (1.00) | yesbut (0.75) | yesbut (0.75) | Sep 4, 2018 |
| Mouse Genome Informatics: Human Phenotype (HPO) Browser | The FAIRshake tool rubric |
|
no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | yesbut (0.75) | yesbut (0.75) | Sep 4, 2018 |
| Mouse Genome Informatics: Human Mouse: Disease Connection (HMDC) | The FAIRshake tool rubric |
|
yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yesbut (0.75) | yesbut (0.75) | Sep 4, 2018 |
| Mouse Genome Informatics: Gene Expression Data Query | The FAIRshake tool rubric |
|
no (0.00) | yes (1.00) | yes (1.00) | yesbut (0.75) | no (0.00) | no (0.00) | yes (1.00) | yesbut (0.75) | yesbut (0.75) | Sep 4, 2018 |
| Mouse Genome Informatics: SNP Query | The FAIRshake tool rubric |
|
yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | yesbut (0.75) | yesbut (0.75) | Sep 4, 2018 |
| Mouse Genome Informatics: Inbred Strain Characteristics | The FAIRshake tool rubric |
|
yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yesbut (0.75) | yesbut (0.75) | Sep 4, 2018 |
| Mouse Genome Informatics: Genealogy Chart of Inbred Strains | The FAIRshake tool rubric |
|
yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yesbut (0.75) | yesbut (0.75) | Sep 4, 2018 |
| Mouse Genome Informatics: Reference Query | The FAIRshake tool rubric |
|
no (0.00) | yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yesbut (0.75) | yesbut (0.75) | Sep 4, 2018 |
| Mouse Genome Informatics: Gene Expression Literature Query | The FAIRshake tool rubric |
|
yesbut (0.75) | yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yesbut (0.75) | yesbut (0.75) | Sep 4, 2018 |
| Mouse Genome Informatics: GO Browser | The FAIRshake tool rubric |
|
yesbut (0.75) | yes (1.00) | yes (1.00) | yesbut (0.75) | no (0.00) | no (0.00) | yes (1.00) | yesbut (0.75) | yesbut (0.75) | Sep 4, 2018 |
| Mouse Genome Informatics: Adult Mouse Anatomy Browser | The FAIRshake tool rubric |
|
yesbut (0.75) | yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yesbut (0.75) | yesbut (0.75) | Sep 4, 2018 |
