Dockstore Automated Testing

A project to hold automated dockstore assessments

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Project Assessments (104)


Assessment Metrics
Target Rubric   Globally unique identifier Persistent identifier Machine-readable metadata Standardized metadata Resource identifier in metadata Resource discovery through web search Open, Free, Standardized Access protocol Persistence of resource and metadata Resource uses formal language FAIR vocabulary Linked Digital resource license Metadata license Provenance scheme Certificate of compliance to community standard
sequenza FAIR metrics by fairmetrics.org
yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) maybe (0.50) no (0.00) no (0.00) yes (1.00) no (0.00) no (0.00) no (0.00) no (0.00)
bric-embl_delly_workflow FAIR metrics by fairmetrics.org
yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) maybe (0.50) no (0.00) no (0.00) yes (1.00) no (0.00) no (0.00) no (0.00) no (0.00)
pcawg_delly_workflow FAIR metrics by fairmetrics.org
yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) maybe (0.50) no (0.00) no (0.00) yes (1.00) no (0.00) no (0.00) no (0.00) no (0.00)
pcawg_sv_merge FAIR metrics by fairmetrics.org
yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) maybe (0.50) no (0.00) no (0.00) yes (1.00) no (0.00) no (0.00) no (0.00) no (0.00)
svaba_workflow FAIR metrics by fairmetrics.org
yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) maybe (0.50) no (0.00) no (0.00) yes (1.00) no (0.00) no (0.00) no (0.00) no (0.00)
dockstore-training-fastqc-ar FAIR metrics by fairmetrics.org
yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) maybe (0.50) no (0.00) no (0.00) yes (1.00) no (0.00) no (0.00) no (0.00) no (0.00)
dockstore-tool-runner FAIR metrics by fairmetrics.org
yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) maybe (0.50) no (0.00) no (0.00) yes (1.00) no (0.00) no (0.00) no (0.00) no (0.00)
dockstore-tool-gene-by-cell-creator FAIR metrics by fairmetrics.org
yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) maybe (0.50) no (0.00) no (0.00) yes (1.00) no (0.00) no (0.00) no (0.00) no (0.00)
dockstore_tool_adtex FAIR metrics by fairmetrics.org
yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) maybe (0.50) no (0.00) no (0.00) yes (1.00) no (0.00) no (0.00) no (0.00) no (0.00)
dockstore_tool_arriba FAIR metrics by fairmetrics.org
yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) maybe (0.50) no (0.00) no (0.00) yes (1.00) no (0.00) no (0.00) no (0.00) no (0.00)
dockstore_tool_varscan_cnv FAIR metrics by fairmetrics.org
yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) maybe (0.50) no (0.00) no (0.00) yes (1.00) no (0.00) no (0.00) no (0.00) no (0.00)
dockstore_workflow_cnv FAIR metrics by fairmetrics.org
yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) maybe (0.50) no (0.00) no (0.00) yes (1.00) no (0.00) no (0.00) no (0.00) no (0.00)
dockstore_workflow_fusion FAIR metrics by fairmetrics.org
yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) maybe (0.50) no (0.00) no (0.00) yes (1.00) no (0.00) no (0.00) no (0.00) no (0.00)
dockstore_workflow_snps FAIR metrics by fairmetrics.org
yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) maybe (0.50) no (0.00) no (0.00) yes (1.00) no (0.00) no (0.00) no (0.00) no (0.00)
protect FAIR metrics by fairmetrics.org
yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) maybe (0.50) no (0.00) no (0.00) yes (1.00) no (0.00) no (0.00) no (0.00) no (0.00)
rnaseq-cgl-pipeline FAIR metrics by fairmetrics.org
yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) maybe (0.50) no (0.00) no (0.00) yes (1.00) no (0.00) no (0.00) no (0.00) no (0.00)
ga4gh_challenge FAIR metrics by fairmetrics.org
yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) maybe (0.50) no (0.00) no (0.00) yes (1.00) no (0.00) no (0.00) no (0.00) no (0.00)
EOSC-Pilot FAIR metrics by fairmetrics.org
yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) maybe (0.50) no (0.00) no (0.00) yes (1.00) no (0.00) no (0.00) no (0.00) no (0.00)
dockstore-tool-bamstats FAIR metrics by fairmetrics.org
yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) maybe (0.50) no (0.00) no (0.00) yes (1.00) no (0.00) no (0.00) no (0.00) no (0.00)
postgres/private_demo FAIR metrics by fairmetrics.org
yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) maybe (0.50) no (0.00) no (0.00) yes (1.00) no (0.00) no (0.00) no (0.00) no (0.00)
dockstore-tool-bedtools-genomecov FAIR metrics by fairmetrics.org
yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) maybe (0.50) no (0.00) no (0.00) yes (1.00) no (0.00) no (0.00) no (0.00) no (0.00)
dockstore-tool-bwa-aln FAIR metrics by fairmetrics.org
yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) maybe (0.50) no (0.00) no (0.00) yes (1.00) no (0.00) no (0.00) no (0.00) no (0.00)
dockstore-tool-bwa-mem FAIR metrics by fairmetrics.org
yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) maybe (0.50) no (0.00) no (0.00) yes (1.00) no (0.00) no (0.00) no (0.00) no (0.00)
dockstore-tool-bwa-samse FAIR metrics by fairmetrics.org
yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) maybe (0.50) no (0.00) no (0.00) yes (1.00) no (0.00) no (0.00) no (0.00) no (0.00)
dockstore-tool-kallisto FAIR metrics by fairmetrics.org
yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) maybe (0.50) no (0.00) no (0.00) yes (1.00) no (0.00) no (0.00) no (0.00) no (0.00)