{"id":6240,"projects":[69],"description":"Convert a bedGraph file to bigWig format (see also http://www.ncbi.nlm.nih.gov/pubmed/20639541 )\n\nusage:\n   bedGraphToBigWig in.bedGraph chrom.sizes out.bw\n   \nwhere in.bedGraph is a four column file in the format:\n      <chrom> <start> <end> <value>\nand chrom.sizes is a two-column file/URL: <chromosome name> <size in bases>\nand out.bw is the output indexed big wig file.\nIf the assembly <db> is hosted by UCSC, chrom.sizes can be a URL like\n  http://hgdownload.cse.ucsc.edu/goldenPath/<db>/bigZips/<db>.chrom.sizes\nor you may use the script fetchChromSizes to download the chrom.sizes file.\nIf not hosted by UCSC, a chrom.sizes file can be generated by running\ntwoBitInfo on the assembly .2bit file.\nThe input bedGraph file must be sorted, use the unix sort command:\n  sort -k1,1 -k2,2n unsorted.bedGraph > sorted.bedGraph","image":"","tags":"","type":"","title":"postgres/private_demo","url":"https://dockstore.org/api/api/ga4gh/v2/tools/registry.hub.docker.com%2Fpostgres%2Fpostgres%2Fprivate_demo","authors":[1],"rubrics":[25]}