NCBI-Hackathons: FAIRy-COMPASS FAIRness assessment of NCBI Hackathon PProducts

FAIRness assessment for NCBI Hackathon products

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Project Assessments (223)


Assessment Metrics Date
Target Rubric   Dockerfile available ReadMe Available Informative Description The tool can be freely downloaded or accessed from a webpage. Source code is shared in a public repository and is documented. Previous versions of the tool are made available. The tool can be accessed programmatically through an API and follows community standards for open APIs. Licensing information is provided on the tool’s homepage. The tool has a unique name and an informative description. The tool can be freely downloaded or accessed from a webpage. The tool utilizes a community-accepted ontology. Tutorials for the tool are available on the tool’s homepage. Source code is shared in a public repository and is documented. Previous versions of the tool are made available. Contact information is provided for the creator(s) of the tool and information describing how to cite the tool is provided. The tool can be accessed programmatically through an API and follows community standards for open APIs. Licensing information is provided on the tool’s homepage. Contact information is provided for the creator(s) of the dataset. Information is provided describing how to cite the dataset. The metadata includes a title for the data resource Use of a formal, accessible, shared, and broadly applicable language for knowledge representation. Domains in use are clearly defined and use community accepted terminology Provenance scheme
NCBI-Hackathons/SimpleGeneExpression The FAIRshake tool rubric
                yes (1.00) yes (1.00) nobut (0.25) yes (1.00) yes (1.00) yes (1.00) yesbut (0.75) yesbut (0.75) yes (1.00)             Feb 21, 2019
NCBI-Hackathons/hackathon_v001_rnaseq NCBI Hackathon Rubric
no (0.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00)     yes (1.00)                       yes (1.00)       Feb 22, 2019
NCBI-Hackathons/hackathon_v001_epigenomics NCBI Hackathon Rubric
no (0.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00)     yes (1.00)                       yes (1.00)       Feb 22, 2019
NCBI-Hackathons/hackathon_v001_metagenomics NCBI Hackathon Rubric
no (0.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00)     yes (1.00)                       yes (1.00)       Feb 22, 2019
NCBI-Hackathons/HASSL_Homogeneous_Analysis_of_SRA_rnaSequencing_Libraries NCBI Hackathon Rubric
no (0.00) yes (1.00) no (0.00) yes (1.00) yes (1.00)     yes (1.00)                       yes (1.00)       Feb 22, 2019
NCBI-Hackathons/RNA-seq_Comparison_Pipeline NCBI Hackathon Rubric
no (0.00) yes (1.00) no (0.00) yes (1.00) yes (1.00)     yes (1.00)                       yes (1.00)       Feb 22, 2019
NCBI-Hackathons/NCBI_August_Hackathon_Push_Button_Genomics_Solution NCBI Hackathon Rubric
no (0.00) yes (1.00) no (0.00) yes (1.00) yes (1.00)     yes (1.00)                       yes (1.00)       Feb 22, 2019
NCBI-Hackathons/seqr NCBI Hackathon Rubric
yes (1.00) yes (1.00) no (0.00) yes (1.00) yes (1.00)     yes (1.00)                       yes (1.00)       Feb 22, 2019
NCBI-Hackathons/Pharmacogenomics_Prediction_Pipeline_P3 NCBI Hackathon Rubric
no (0.00) yes (1.00) no (0.00) yes (1.00) yes (1.00)     yes (1.00)                       yes (1.00)       Feb 22, 2019
NCBI-Hackathons/movetest NCBI Hackathon Rubric
no (0.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00)     yes (1.00)                       yes (1.00)       Feb 22, 2019
NCBI-Hackathons/DASH_cell_type NCBI Hackathon Rubric
no (0.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00)     yes (1.00)                       yes (1.00)       Feb 22, 2019
NCBI-Hackathons/Community_Software_Tools_for_NGS NCBI Hackathon Rubric
no (0.00) yes (1.00) no (0.00) yes (1.00) yes (1.00)     yes (1.00)                       yes (1.00)       Feb 22, 2019
NCBI-Hackathons/Educational_Resources NCBI Hackathon Rubric
no (0.00) yes (1.00) no (0.00) yes (1.00) yes (1.00)     yes (1.00)                       yes (1.00)       Feb 22, 2019
NCBI-Hackathons/Resources_for_Designing_Hackathons NCBI Hackathon Rubric
no (0.00) yes (1.00) no (0.00) yes (1.00) yes (1.00)     yes (1.00)                       yes (1.00)       Feb 22, 2019
NCBI-Hackathons/Structural_Variant_Comparison NCBI Hackathon Rubric
no (0.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00)     yes (1.00)                       yes (1.00)       Feb 22, 2019
NCBI-Hackathons/iMETRIC NCBI Hackathon Rubric
no (0.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00)     yes (1.00)                       yes (1.00)       Feb 22, 2019
NCBI-Hackathons/Metadata_categorization NCBI Hackathon Rubric
no (0.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00)     yes (1.00)                       yes (1.00)       Feb 22, 2019
NCBI-Hackathons/Network_SNPs NCBI Hackathon Rubric
no (0.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00)     yes (1.00)                       yes (1.00)       Feb 22, 2019
NCBI-Hackathons/SRA2R NCBI Hackathon Rubric
no (0.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00)     yes (1.00)                       yes (1.00)       Feb 22, 2019
NCBI-Hackathons/Structure_Visualization NCBI Hackathon Rubric
no (0.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00)     yes (1.00)                       yes (1.00)       Feb 22, 2019
NCBI-Hackathons/rnaseqview NCBI Hackathon Rubric
no (0.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00)     yes (1.00)                       yes (1.00)       Feb 22, 2019
NCBI-Hackathons/immunogenicity NCBI Hackathon Rubric
no (0.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00)     yes (1.00)                       yes (1.00)       Feb 22, 2019
NCBI-Hackathons/neuronvar NCBI Hackathon Rubric
no (0.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00)     yes (1.00)                       yes (1.00)       Feb 22, 2019
NCBI-Hackathons/sv_and_isoforms_from_RNAseq NCBI Hackathon Rubric
no (0.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00)     yes (1.00)                       yes (1.00)       Feb 22, 2019
NCBI-Hackathons/3Dvizongenome NCBI Hackathon Rubric
no (0.00) yes (1.00) no (0.00) yes (1.00) yes (1.00)     yes (1.00)                       yes (1.00)       Feb 22, 2019