Metabolomics: FAIR Assessment of NIH Common Fund Resources with C2M2
projectTags: nihcommonfund
URL(s):
- https://commonfund.nih.gov/metabolomics
- https://www.metabolomicsworkbench.org/
- https://github.com/nih-cfde/FAIR/tree/master/Metabolomics
Project Assessments (6697)
| Assessment | Metrics | Date | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Target | Rubric | NIH program name is available for querying | NIH project name is available for querying | The institution that created this dataset is available | A biological assay is present and resolvable in CFDE-specified ontology (OBI) | A relevant anatomical part is present and resolvable in the UBERON Ontology | A relevant disease is present and resolvable in the MONDO Ontology | A relevant file type is present and resolvable in the EDAM Ontology | A relevant taxonomy is present and resolvable in the NCBITaxon Ontology | A relevant cell line is present and resolvable in the Cellosaurus Ontology | A landing page exists and is accessible | Contact information is provided for the creator(s) of the dataset. | Globally unique identifier | Persistent identifier | Machine-readable metadata | Standardized metadata | Resource identifier in metadata | Resource discovery through web search | Open, Free, Standardized Access protocol | Protocol to access restricted content | Persistence of resource and metadata | Resource uses formal language | FAIR vocabulary | Linked | Digital resource license | Metadata license | Provenance scheme | Certificate of compliance to community standard | ||
| Effects of selenate and cadmium exposure on the honey bee metabolome | FAIR metrics by fairmetrics.org |
|
no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | Jul 29, 2019 | ||||||||||||
| P. falciparum infected erythrocytes | FAIR metrics by fairmetrics.org |
|
no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | Jul 29, 2019 | ||||||||||||
| Sepsis-related metabolic changes in ileum, jejunum, skeletal muscle, liver and lung | FAIR metrics by fairmetrics.org |
|
no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | Jul 29, 2019 | ||||||||||||
| Metabolome of ginsenoside anti-tumor | FAIR metrics by fairmetrics.org |
|
no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | Jul 29, 2019 | ||||||||||||
| A library of human gut bacterial isolates paired with longitudinal multiomics data enables mechanistic microbiome research | FAIR metrics by fairmetrics.org |
|
no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | Jul 29, 2019 | ||||||||||||
| Flavonoid study of Ginkgo leaves facing to different elevation and plant age | FAIR metrics by fairmetrics.org |
|
no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | Jul 29, 2019 | ||||||||||||
| Non-targeted GC-MS Analysis of Polar Soluble Fraction (part-I) | FAIR metrics by fairmetrics.org |
|
no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | Jul 29, 2019 | ||||||||||||
| Non-targeted GC-MS Analysis of Insoluble Metabolites (part-II) | FAIR metrics by fairmetrics.org |
|
no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | Jul 29, 2019 | ||||||||||||
| GC-MS Analysis of Insoluble/Polymeric Amino Acids (part-III) | FAIR metrics by fairmetrics.org |
|
no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | Jul 29, 2019 | ||||||||||||
| Targeted LC-MS/MS Analysis of Soluble Metabolites in the MeOH:H2O Phase (part-IV) | FAIR metrics by fairmetrics.org |
|
no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | Jul 29, 2019 | ||||||||||||
| Non-targeted LC-MS Analysis of Soluble Metabolites in the Non-Polar MTBE Phase (part-V) | FAIR metrics by fairmetrics.org |
|
no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | Jul 29, 2019 | ||||||||||||
| Peroxide antimalarial treatment timecourse on trophozoite-stage P. falciparum parasites | FAIR metrics by fairmetrics.org |
|
no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | Jul 29, 2019 | ||||||||||||
| Peroxide antimalarial treatment timecourse on ring-stage P. falciparum parasites | FAIR metrics by fairmetrics.org |
|
no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | Jul 29, 2019 | ||||||||||||
| Peroxide antimalarial extended treatment timecourse on trophozoite-stage P. falciparum parasites | FAIR metrics by fairmetrics.org |
|
no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | Jul 29, 2019 | ||||||||||||
| Peroxide antimalarial treatment of K13-mutant and -wildtype P. falciparum parasites | FAIR metrics by fairmetrics.org |
|
no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | Jul 29, 2019 | ||||||||||||
| Effects of cold exposure on serum lipidomic in mice | FAIR metrics by fairmetrics.org |
|
no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | Jul 29, 2019 | ||||||||||||
| Lipidomics in the serum of cold exposed mice treated with 12-LOX inhibitor LOXBlock-1 | FAIR metrics by fairmetrics.org |
|
no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | Jul 29, 2019 | ||||||||||||
| Characterization of feces in Atrial Fibrillation (AF) patients | FAIR metrics by fairmetrics.org |
|
no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | Jul 29, 2019 | ||||||||||||
| Timecourse on RAW 264.7 cells treated with Kdo2-Lipid A and compactin | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
no (0.00) | yes (1.00) | yesbut (0.75) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | maybe (0.50) | no (0.00) | yes (1.00) | yesbut (0.75) | yes (1.00) | no (0.00) | yes (1.00) | Sep 23, 2019 | ||||||||||
| High PUFA diet in humans | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
no (0.00) | yes (1.00) | yesbut (0.75) | nobut (0.25) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | maybe (0.50) | no (0.00) | yes (1.00) | yesbut (0.75) | yes (1.00) | no (0.00) | yes (1.00) | Sep 23, 2019 | ||||||||||
| Rice Infection Study | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
no (0.00) | yes (1.00) | yesbut (0.75) | nobut (0.25) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | maybe (0.50) | no (0.00) | yes (1.00) | yesbut (0.75) | yes (1.00) | no (0.00) | yes (1.00) | Sep 23, 2019 | ||||||||||
| Metabolomics Analysis of Diabetes and the Cori Cycle (part I) | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
no (0.00) | yes (1.00) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | no (0.00) | no (0.00) | yes (0.92) | yesbut (0.75) | yes (1.00) | no (0.00) | yes (1.00) | Sep 23, 2019 | ||||||||||
| Metabolic Profiling of Visceral and Subcutaneous Adipose Tissue from Colorectal Cancer Patients: GC-TOF MS analyis of serum samples | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
no (0.00) | yes (1.00) | yesbut (0.75) | nobut (0.25) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | maybe (0.50) | no (0.00) | yes (1.00) | yesbut (0.75) | yes (1.00) | no (0.00) | yes (1.00) | Sep 23, 2019 | ||||||||||
| Extraction Optimization Study | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
no (0.00) | yes (1.00) | yesbut (0.75) | nobut (0.25) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | maybe (0.50) | no (0.00) | yes (1.00) | yesbut (0.75) | yes (1.00) | no (0.00) | yes (1.00) | Sep 23, 2019 | ||||||||||
| Lipidomics studies on NIDDK / NIST human plasma samples | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
no (0.00) | yes (1.00) | yesbut (0.75) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | maybe (0.50) | no (0.00) | yes (1.00) | yesbut (0.75) | yes (1.00) | no (0.00) | yes (1.00) | Sep 23, 2019 | ||||||||||
