FAIRshake

FAIRshake Testing

project

This project contains arbitrary Digital Objects and is being used for testing purposes.

Tags: dcppc test

URL(s):

https://fairshake.cloud/

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Project Assessments (43)

Assessment			Metrics
Target	Rubric		SmartAPI fields described with an 'x-type' and 'x-description'	NIH program name is available for querying	NIH project name is available for querying	The institution that created this dataset is available	A biological assay is present and resolvable in CFDE-specified ontology (OBI)	A relevant anatomical part is present and resolvable in the UBERON Ontology	A relevant disease is present and resolvable in the MONDO Ontology	A relevant file type is present and resolvable in the EDAM Ontology	A relevant taxonomy is present and resolvable in the NCBITaxon Ontology	A relevant cell line is present and resolvable in the Cellosaurus Ontology	A landing page exists and is accessible	Licensing information is provided on the tools homepage.	The tool utilizes a community-accepted ontology.	The tool has a unique name and an informative description.	A standardized ID or accession number is used to identify the dataset.	The tool can be freely downloaded or accessed from a webpage.	Tutorials for the tool are available on the tools homepage.	The dataset is hosted in an established data repository, if a relevant repository exists.	The dataset can be downloaded for free from the repository.	Version information is provided for the dataset.	Contact information is provided for the creator(s) of the dataset.	The tool can be accessed programmatically through an API and follows community standards for open APIs.	Licensing information is provided on the datasets landing page.	The structure of the repository permits efficient discovery of data and metadata by end users.	The repository provides documentation for each resource to permit its complete and accurate citation.	Version information is provided for each resource, where available.	ANISEED database	Relevant Drug or Small Molecule terms are resolvable in PubChem	Relevant Gene IDs are resolvable as NCBI Entrez Genes	The metadata includes a title for the data resource	The metadata specifies the creators	The metadata includes a description of what the data is about	no cost to access the data resource	Source code is shared in a public repository and is documented.	Previous versions of the tool are made available.	Machine-readable metadata that describes a digital resource is available.	Contact information is provided for the creator(s) of the tool and information describing how to cite the tool is provided.	What is the nature and use limitations of the access protocol.	Taxonomies in use are clearly defined and use community accepted terminology	Licensing information is provided on the tools homepage.	Globally unique identifier	Persistent identifier	Machine-readable metadata	Standardized metadata	Resource identifier in metadata	Resource discovery through web search	Open, Free, Standardized Access protocol	Protocol to access restricted content	Persistence of resource and metadata	Resource uses formal language	FAIR vocabulary	Linked	Digital resource license	Metadata license	Provenance scheme	Certificate of compliance to community standard	Update information is available	Attribution information is available	Terms of Service	Tags	All parameters have descriptions	All paths have descriptions	All responses have descriptions	All paths have a unique operation ID
L1000 Dataset -small molecule, CRISPR perturbagens- LINCS Phase 2 (December 2015)	FAIR metrics by fairmetrics.org																																										yes (1.00)	yes (1.00)	yes (1.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)
L1000 Dataset -small molecule, CRISPR perturbagens- LINCS Phase 2 (December 2015)	NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric
L1000 Dataset -small molecule, CRISPR perturbagens- LINCS Phase 2 (December 2015)	NIH Common Fund Data Ecosystem: LINCS (CFDE-LINCS) FAIR Rubric
L1000 Dataset -small molecule, CRISPR perturbagens- LINCS Phase 2 (December 2015)	FAIR metrics by fairmetrics.org
L1000 Dataset -small molecule, CRISPR perturbagens- LINCS Phase 2 (December 2015)	FAIR metrics by fairmetrics.org																																										yes (1.00)	yes (1.00)	yes (1.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)
L1000 Dataset -small molecule, CRISPR perturbagens- LINCS Phase 2 (December 2015)	FAIR metrics by fairmetrics.org
L1000 Dataset -small molecule, CRISPR perturbagens- LINCS Phase 2 (December 2015)	FAIR metrics by fairmetrics.org																																										yes (1.00)	yes (1.00)	yes (1.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)
L1000 Dataset -small molecule, CRISPR perturbagens- LINCS Phase 2 (December 2015)	FAIR metrics by fairmetrics.org																																										yes (1.00)	yes (1.00)	yes (1.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)	no (0.00)
COVID-19 Open Research Dataset Challenge (CORD-19)	FAIR metrics by fairmetrics.org																																										yes (1.00)	no (0.00)	yes (1.00)	no (0.00)	yes (1.00)	yes (1.00)	yes (1.00)	yes (1.00)	no (0.00)	yes (1.00)	no (0.00)	yes (1.00)	yes (1.00)	yes (1.00)	yes (1.00)	no (0.00)
Harmonizome	FAIRshake JSON-LD Rubric
Harmonizome	The SmartAPI Rubric
L1000 Dataset -small molecule, CRISPR perturbagens- LINCS Phase 2 (December 2015)	FAIR metrics by fairmetrics.org
The Extracellular RNA Atlas (exRNA)	FAIR metrics by fairmetrics.org																																											yes (1.00)	yes (1.00)							yes (1.00)	yes (1.00)					yes (1.00)
Jaspar tool	FAIRshake JSON-LD Rubric
Jaspar tool	FAIRshake Semi Automation
Jaspar tool	FAIR metrics by fairmetrics.org
Jaspar tool	The FAIRshake tool rubric
Jaspar tool	FAIR metrics by fairmetrics.org

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