The FAIRshake tool rubric

rubric

An initial rubric for asking questions about tools.

License: MIT

Tags: test fairshake

View Associations

Rubric Assessments (785)


Assessment Metrics Date
Target Project   The tool has a unique name and an informative description. The tool can be freely downloaded or accessed from a webpage. The tool utilizes a community-accepted ontology. Tutorials for the tool are available on the tool’s homepage. Source code is shared in a public repository and is documented. Previous versions of the tool are made available. Contact information is provided for the creator(s) of the tool and information describing how to cite the tool is provided. The tool can be accessed programmatically through an API and follows community standards for open APIs. Licensing information is provided on the tool’s homepage. ANISEED database
FlyBase: BLAST FAIRness of Alliance of Genome Resources
nobut (0.25) yes (1.00) nobut (0.25) yesbut (0.75) no (0.00) nobut (0.25) yes (1.00) no (0.00) no (0.00)   Sep 4, 2018
FlyBase: ImageBrowse FAIRness of Alliance of Genome Resources
yes (1.00) yes (1.00) yes (1.00) yesbut (0.75) no (0.00) no (0.00) yes (1.00) no (0.00) yesbut (0.75)   Sep 4, 2018
The Rat Genome Database: Map Report FAIRness of Alliance of Genome Resources
yes (1.00) yes (1.00) yes (1.00) no (0.00) no (0.00) no (0.00) yes (1.00) yes (1.00) no (0.00)   Sep 4, 2018
The Rat Genome Database: Genome Information FAIRness of Alliance of Genome Resources
nobut (0.25) yes (1.00) yes (1.00) no (0.00) no (0.00) no (0.00) yes (1.00) no (0.00) no (0.00)   Sep 4, 2018
FlyBase: Gbrowse FAIRness of Alliance of Genome Resources
yesbut (0.75) yes (1.00) yes (1.00) yes (1.00) no (0.00) no (0.00) yes (1.00) no (0.00) yesbut (0.75)   Sep 4, 2018
The Rat Genome Database: Reference Search FAIRness of Alliance of Genome Resources
yesbut (0.75) yes (1.00) yes (1.00) no (0.00) no (0.00) no (0.00) yes (1.00) yes (1.00) no (0.00)   Sep 4, 2018
FlyBase: Jbrowse FAIRness of Alliance of Genome Resources
yes (1.00) yes (1.00) yes (1.00) yes (1.00) no (0.00) no (0.00) yes (1.00) no (0.00) yesbut (0.75)   Sep 4, 2018
The Rat Genome Database: RGD Sequence Query Form FAIRness of Alliance of Genome Resources
yes (1.00) yes (1.00) yes (1.00) no (0.00) no (0.00) no (0.00) yes (1.00) yes (1.00) no (0.00)   Sep 4, 2018
FlyBase: Feature Mapper FAIRness of Alliance of Genome Resources
yesbut (0.75) yes (1.00) yes (1.00) yes (1.00) no (0.00) no (0.00) yes (1.00) no (0.00) yesbut (0.75)   Sep 4, 2018
FlyBase: Chromosome Maps FAIRness of Alliance of Genome Resources
yesbut (0.75) yes (1.00) yesbut (0.75) no (0.00) no (0.00) no (0.00) yes (1.00) no (0.00) yesbut (0.75)   Sep 4, 2018
Mouse Genome Informatics: Genes & Markers Query FAIRness of Alliance of Genome Resources
yes (1.00) yes (1.00) yes (1.00) yes (1.00) no (0.00) no (0.00) yes (1.00) yesbut (0.75) yesbut (0.75)   Sep 4, 2018
Mouse Genome Informatics: Batch Query FAIRness of Alliance of Genome Resources
yes (1.00) yes (1.00) yes (1.00) no (0.00) no (0.00) no (0.00) yes (1.00) yesbut (0.75) yesbut (0.75)   Sep 4, 2018
Mouse Genome Informatics: Mouse Genome Browser FAIRness of Alliance of Genome Resources
yesbut (0.75) yes (1.00) yes (1.00) yes (1.00) no (0.00) no (0.00) yes (1.00) yesbut (0.75) yesbut (0.75)   Sep 4, 2018
MouseMine FAIRness of Alliance of Genome Resources
yes (1.00) yes (1.00) yes (1.00) yes (1.00) no (0.00) no (0.00) yes (1.00) yesbut (0.75) yesbut (0.75)   Sep 4, 2018
Mouse Genome Informatics: Phenotypes, Alleles & Diseases Query FAIRness of Alliance of Genome Resources
yes (1.00) yes (1.00) yes (1.00) yes (1.00) no (0.00) no (0.00) yes (1.00) yesbut (0.75) yesbut (0.75)   Sep 4, 2018
Mouse Genome Informatics: Mammalian Phenotype (MP) Browser FAIRness of Alliance of Genome Resources
yesbut (0.75) yes (1.00) yes (1.00) no (0.00) no (0.00) no (0.00) yes (1.00) yesbut (0.75) yesbut (0.75)   Sep 4, 2018
Mouse Genome Informatics: Disease Ontology Browser FAIRness of Alliance of Genome Resources
no (0.00) yes (1.00) yes (1.00) yesbut (0.75) no (0.00) no (0.00) yes (1.00) yesbut (0.75) yesbut (0.75)   Sep 4, 2018
Mouse Genome Informatics: Human Phenotype (HPO) Browser FAIRness of Alliance of Genome Resources
no (0.00) yes (1.00) yes (1.00) no (0.00) no (0.00) no (0.00) yes (1.00) yesbut (0.75) yesbut (0.75)   Sep 4, 2018
Mouse Genome Informatics: Human – Mouse: Disease Connection (HMDC) FAIRness of Alliance of Genome Resources
yes (1.00) yes (1.00) yes (1.00) yes (1.00) no (0.00) no (0.00) yes (1.00) yesbut (0.75) yesbut (0.75)   Sep 4, 2018
Mouse Genome Informatics: Gene Expression Data Query FAIRness of Alliance of Genome Resources
no (0.00) yes (1.00) yes (1.00) yesbut (0.75) no (0.00) no (0.00) yes (1.00) yesbut (0.75) yesbut (0.75)   Sep 4, 2018
Mouse Genome Informatics: Gene Expression Literature Query FAIRness of LINCS Datasets and Tools
yes (1.00) yes (1.00) yes (1.00) yes (1.00) no (0.00) no (0.00) yes (1.00) yesbut (0.75) yesbut (0.75)   Sep 4, 2018
Mouse Genome Informatics: Mouse Developmental Anatomy Browser FAIRness of LINCS Datasets and Tools
yes (1.00) yes (1.00) yes (1.00) no (0.00) no (0.00) no (0.00) yes (1.00) yesbut (0.75) yesbut (0.75)   Sep 4, 2018
Mouse Genome Informatics: SNP Query FAIRness of Alliance of Genome Resources
yes (1.00) yes (1.00) yes (1.00) no (0.00) no (0.00) no (0.00) yes (1.00) yesbut (0.75) yesbut (0.75)   Sep 4, 2018
Mouse Genome Informatics: Inbred Strain Characteristics FAIRness of Alliance of Genome Resources
yes (1.00) yes (1.00) yes (1.00) yes (1.00) no (0.00) no (0.00) yes (1.00) yesbut (0.75) yesbut (0.75)   Sep 4, 2018
Mouse Genome Informatics: Genealogy Chart of Inbred Strains FAIRness of Alliance of Genome Resources
yes (1.00) yes (1.00) yes (1.00) yes (1.00) no (0.00) no (0.00) yes (1.00) yesbut (0.75) yesbut (0.75)   Sep 4, 2018