GTEx: Assessment of NIH Common Fund Resources with C2M2
Tags: nihcommonfund
URL(s):
- https://commonfund.nih.gov/gtex
- https://gtexportal.org/home/datasets
- https://github.com/nih-cfde/FAIR/tree/master/GTEx
Project Assessments (48936)
| Assessment | Metrics | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Target | Rubric | NIH program name is available for querying | NIH project name is available for querying | Machine-readable metadata | The institution that created this dataset is available | A biological assay is present and resolvable in CFDE-specified ontology (OBI) | A relevant anatomical part is present and resolvable in the UBERON Ontology | Open, Free, Standardized Access protocol | A relevant disease is present and resolvable in the MONDO Ontology | A relevant file type is present and resolvable in the EDAM Ontology | A relevant taxonomy is present and resolvable in the NCBITaxon Ontology | A relevant cell line is present and resolvable in the Cellosaurus Ontology | Globally unique identifier | Digital resource license | Resource identifier in metadata | A landing page exists and is accessible | Metadata license | Contact information is provided for the creator(s) of the dataset. | |
| iMN (Exp 2) - ALS, SMA and Control (unaffected) iMN cell lines differentiated from iPS cell lines using a long differentiation protocol - RNA-seq | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
no (0.00) | yes (1.00) | yes (1.00) | yesbut (0.75) | nobut (0.25) | no (0.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | no (0.00) | no (0.00) | no (0.00) | yesbut (0.75) | yes (1.00) | yes (1.00) | maybe (0.50) |
| https://gtexportal.org/GTEX-UPIC-0005-SM-3GACV/SRX222304 | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
yes (1.00) | yes (1.00) | yes (0.86) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | |
| https://gtexportal.org/GTEX-OHPN-0004-SM-5JK2V/SRX1152398 | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
yes (1.00) | yes (1.00) | yes (0.86) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | |
| https://gtexportal.org/GTEX-17F96-0226-SM-7EPGV/SRX5044588 | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
yes (1.00) | yes (1.00) | yes (0.86) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | |
| https://gtexportal.org/GTEX-13NZA-0526-SM-5L3D7/SRX589808 | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
yes (1.00) | yes (1.00) | yes (0.86) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | |
| https://gtexportal.org/GTEX-13FXS-0004-SM-6WSB8/SRX5051569 | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
yes (1.00) | yes (1.00) | yes (0.86) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | |
| https://gtexportal.org/GTEX-13O3O-3126-SM-5KM3H/SRX563083 | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
yes (1.00) | yes (1.00) | yes (0.86) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | |
| https://gtexportal.org/GTEX-12C56-2026-SM-5FQSI/SRX5037948 | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
yes (1.00) | yes (1.00) | yes (0.86) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | |
| https://gtexportal.org/GTEX-14BMV-2926-SM-5TDEE/SRX5041232 | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
yes (1.00) | yes (1.00) | yes (0.86) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | |
| https://gtexportal.org/GTEX-XUW1-0226-SM-4BOOS/SRX409488 | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
yes (1.00) | yes (1.00) | yes (0.86) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | |
| https://gtexportal.org/GTEX-14ASI-0001-SM-7DROX/SRX5051646 | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
yes (1.00) | yes (1.00) | yes (0.86) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | |
| https://gtexportal.org/GTEX-15UF7-0003-SM-6UH2Y/SRX5051723 | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
yes (1.00) | yes (1.00) | yes (0.86) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | |
| https://gtexportal.org/GTEX-13NYC-0004-SM-5DU65/SRX1152807 | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
yes (1.00) | yes (1.00) | yes (0.86) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | |
| https://gtexportal.org/GTEX-YEC3-2326-SM-5IFJF/SRX5049952 | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
yes (1.00) | yes (1.00) | yes (0.86) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | |
| https://gtexportal.org/GTEX-R55E-0011-R4A-SM-2TC5H/SRX203714 | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
yes (1.00) | yes (1.00) | yes (0.86) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | |
| https://gtexportal.org/GTEX-15CHR-0726-SM-7EPHG/SRX5043815 | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
yes (1.00) | yes (1.00) | yes (0.86) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | |
| https://gtexportal.org/GTEX-1AX9J-1926-SM-73KUM/SRX5045378 | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
yes (1.00) | yes (1.00) | yes (0.86) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | |
| https://gtexportal.org/GTEX-13W46-1926-SM-5J2MF/SRX565396 | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
yes (1.00) | yes (1.00) | yes (0.86) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | |
| https://gtexportal.org/K-562-SM-5LZWR/SRX5051417 | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
yes (1.00) | yes (1.00) | yes (0.84) | no (0.00) | yes (1.00) | no (0.00) | no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | |
| https://gtexportal.org/GTEX-11P7K-2026-SM-5GU74/SRX5037449 | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
yes (1.00) | yes (1.00) | yes (0.86) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | |
| https://gtexportal.org/GTEX-14ASI-0001-SM-7DROX/SRX1746598 | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
yes (1.00) | yes (1.00) | yes (0.86) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | |
| https://gtexportal.org/GTEX-X261-1026-SM-3NMDL/SRX260302 | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
yes (1.00) | yes (1.00) | yes (0.86) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | |
| https://gtexportal.org/GTEX-139UC-0011-R6b-SM-5K7Z1/SRX5038951 | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
yes (1.00) | yes (1.00) | yes (0.86) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | |
| https://gtexportal.org/GTEX-133LE-1326-SM-5IFGO/SRX602609 | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
yes (1.00) | yes (1.00) | yes (0.86) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | |
| https://gtexportal.org/GTEX-XUW1-1326-SM-4BOO1/SRX422641 | NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric |
|
yes (1.00) | yes (1.00) | yes (0.86) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | yes (1.00) | no (0.00) | no (0.00) | yes (1.00) | no (0.00) | nobut (0.25) | no (0.00) | |
