Single cell RNA-seq Bio-IT 2019 FAIR Data Hackathon

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Project Assessments (5)


Assessment Metrics
Target Rubric   Dockerfile available The tool can be freely downloaded or accessed from a webpage. ReadMe Available Informative Description Source code is shared in a public repository and is documented. Previous versions of the tool are made available. Can Find The Docker The tool can be accessed programmatically through an API and follows community standards for open APIs. Licensing information is provided on the tool’s homepage. Can Access the Docker Docker is interoperable Can reuse the Docker A standardized ID or accession number is used to identify the dataset. The dataset is described with metadata using a formal, broadly applicable vocabulary. Information is provided on the experimental methods used to generate the data. The dataset is hosted in an established data repository, if a relevant repository exists. The dataset can be downloaded for free from the repository. Version information is provided for the dataset. Contact information is provided for the creator(s) of the dataset. Information is provided describing how to cite the dataset. Licensing information is provided on the dataset’s landing page. The metadata includes a title for the data resource Use of a formal, accessible, shared, and broadly applicable language for knowledge representation. Domains in use are clearly defined and use community accepted terminology Provenance scheme
Source scRNA-seq Bio-IT 2019 FAIR Data Hackathon NCBI Hackathon Rubric
yes (1.00) yes (1.00) yes (1.00) no (0.00) yes (1.00) yesbut (0.75)   no (0.00) yes (1.00)                   yes (1.00) no (0.00)   no (0.00) no (0.00) no (0.00) no (0.00)
Docker infercnv scRNASeq bioithackathon 2019 FAIR Docker Rubric
            yes (1.00)     yesbut (0.75) nobut (0.25) nobut (0.25)                          
GUI scRNA-seq Bio-IT 2019 FAIR Data Hackathon NCBI Hackathon Rubric
nobut (0.25) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yesbut (0.75)   no (0.00) yesbut (0.75)                   yesbut (0.75) nobut (0.25)   yesbut (0.75) no (0.00) nobut (0.25) yes (1.00)
InputDataset scRNA-seq Bio-IT 2019 FAIR Data Hackathon The FAIRshake dataset rubric
                        no (0.00) no (0.00) no (0.00) no (0.00) no (0.00) no (0.00) no (0.00) no (0.00) no (0.00)        
OutputDataset scRNA-seq Bio-IT 2019 FAIR Data Hackathon The FAIRshake dataset rubric
                        yesbut (0.75) yesbut (0.75) yesbut (0.75) yesbut (0.75) yesbut (0.75) no (0.00) no (0.00) no (0.00) no (0.00)