The Library of Integrated Network-Based Cellular Signatures (LINCS)

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The Library of Integrated Network-Based Cellular Signatures (LINCS) Program aims to create a network-based understanding of biology by cataloging changes in gene expression and other cellular processes that occur when cells are exposed to a variety of perturbing agents.

Tags: NIHcommonfund

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Digital Object Assessments (4)


Assessment Metrics Date
Rubric Project   NIH program name is available for querying NIH project name is available for querying The institution that created this dataset is available A biological assay is present and resolvable in CFDE-specified ontology (OBI) A relevant anatomical part is present and resolvable in the UBERON Ontology A relevant disease is present and resolvable in the MONDO Ontology A relevant file type is present and resolvable in the EDAM Ontology A relevant taxonomy is present and resolvable in the NCBITaxon Ontology A relevant cell line is present and resolvable in the Cellosaurus Ontology A landing page exists and is accessible Contact information is provided for the creator(s) of the dataset. The structure of the repository permits efficient discovery of data and metadata by end users. The repository uses a standardized protocol to permit access by users. The repository provides contact information for staff to enable users with questions or suggestions to interact with repository experts. Tools that can be used to analyze each dataset are listed on the corresponding dataset pages. The repository maintains licenses to manage data access and use. The repository hosts data and metadata according to a set of defined criteria to ensure that the resources provided are consistent with the intent of the repository. The repository provides documentation for each resource to permit its complete and accurate citation. A description of the methods used to acquire the data is provided. Version information is provided for each resource, where available. Globally unique identifier Machine-readable metadata Resource identifier in metadata Open, Free, Standardized Access protocol Digital resource license
The FAIRshake repository rubric NIH Data Sharing Repositories
                      no (0.00) yes (1.00) yes (1.00) yesbut (0.75) no (0.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00)           Mar 11, 2019
NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric NIH Common Fund Data Ecosystem (CFDE) FAIR Assessment Summaries
yes (1.00) no (0.00) no (0.00) maybe (0.50) yes (0.99) no (0.00) yesbut (0.75) yes (1.00) no (0.00) yes (0.98) yesbut (0.75)                   maybe (0.50) yes (0.85) yes (1.00) no (0.00) no (0.00) Aug 26, 2021
NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric NIH Common Fund Data Ecosystem (CFDE) FAIR Assessment Summaries
yes (1.00) yes (1.00) no (0.00) yes (1.00) yes (0.99) yes (1.00) yesbut (0.75) yes (1.00) no (0.00) yes (0.98) yesbut (0.75)                   maybe (0.50) yes (0.86) yes (1.00) no (0.00) no (0.00) Oct 18, 2021
NIH Common Fund Data Ecosystem (CFDE) FAIR Rubric NIH Common Fund Data Ecosystem (CFDE) FAIR Assessments
yes (1.00) yes (1.00) no (0.00) yes (1.00) yes (0.99) yes (1.00) yesbut (0.75) yes (1.00) no (0.00) yes (0.98) no (0.00)                   maybe (0.50) yesbut (0.75) yes (1.00) no (0.00) no (0.00) Jan 20, 2022