iBAT (interscapular brown adipose tissue) sympathetic innervation circuit pseudorabies viral tracing in reporter mice

data

Utilizes pseudorabies virus (PRV) retrograde tracing in combination w/reporter mice, iDISCO, & confocal/light-sheet microscopy to identify the location of pre- & post-ganglionic neurons and nerves that selectively innervate the iBAT in the mouse.

Tags: FAIR Data SPARC CFDE

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Digital Object Assessments (1)


Assessment Metrics Date
Rubric Project   Dataset is identified by a persistent identifier A standardized ID or accession number is used to identify the dataset. Metadata is accessed through standardised protocol A landing page exists and is accessible Repository PID resolves to repository landing page Landing page metadata is machine readable Metadata includes the identifier for the dataset. Metadata includes a resolvable identifier for the dataset. Metadata is offered in such a way that it can be harvested and indexed. What is the degree to which the digital resource can be found using web-based search engines Data is accessible through standardised protocol A biological assay is present and resolvable in CFDE-specified ontology (OBI) A relevant anatomical part is present and resolvable in the UBERON Ontology A relevant file type is present and resolvable in the EDAM Ontology A relevant taxonomy is present and resolvable in the NCBITaxon Ontology ORCID Support The institution that created this dataset is available NIH program name is available for querying NIH project or award is available for querying Metadata includes information about the licence under which the data can be reused Metadata includes information about the licence under which the metadata can be reused Licensing information is provided on the datasets landing page Information is provided on the experimental methods used to generate the data Contact information is provided for the creator(s) of the dataset Version information is provided for the dataset Landing page provides full data citation information Landing page metadata complies with Schema.org Dataset is identified by a globally unique identifier The dataset is hosted in an established data repository, if a relevant repository exists. Repository provides a search facility Open, Free, Standardized Access protocol The metadata can be downloaded for free from the repository. The dataset can be downloaded for free from the repository. Dataset is accessible through an access protocol that supports authentication and authorisation Metadata is guaranteed to remain available after data is no longer available Landing page is guaranteed to exist after data is no longer available Metadata can be accessed manually (i.e. with human intervention) Data can be accessed/downloaded manually (i.e. with human intervention) Metadata uses FAIR-compliant vocabularies Repository provides helpdesk support Metadata refers to a machine-understandable reuse licence The metadata provides documentation for a dataset to permit its complete and accurate citation. The repository hosts data and metadata according to a set of defined criteria and community standards Core Trust Seal Certification or equivalent Governance Transparency Repository infrastructure is covered under an Open Source license Data / Metadata License is open / commons compliant Free to use data with no or minimal restrictions Metadata uses knowledge representation expressed in standardised format Rich metadata describes dataset and allows for discovery Metadata includes qualified references to other metadata Metadata includes qualified references to other data
SPARC Rubric FAIR Data Informatics Laboratory - SPARC CFDE
yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) maybe (0.50) yes (1.00) maybe (0.50) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yesbut (0.75) yesbut (0.75) maybe (0.50) maybe (0.50) yes (1.00) maybe (0.50) yes (1.00) yes (1.00) yesbut (0.75) yes (1.00) yes (1.00) yes (1.00) yes (1.00) no (0.00) maybe (0.50) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) Oct 7, 2021