ToolStory Assessments

rubric

Evaluation of tools and datasets.

License: Free

Tags: Tools CF NIH

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Associated Metrics (9)

Licensing information is provided on the tools home page

url

A core aspect of data reusability is the ability to determine, unambiguously and with relative ease,...

btools

The tool has a unique name and an informative description

url

Most people use a search engine to initiate a search for a particular digital resource of interest. ...

btools

The tool can be freely downloaded or accessed from a webpage

url

The change to an identifier scheme will have widespread implications for resource lookup, linking, a...

btools

Machine readable metadata

url

Metadata play an important role in enable users to find a resource of interest. Metadata may be inde...

btools

Tutorials for the tool are available on the toolÂ’s homepage

url

Some digital resources comprise of sensitive data, and require additional measures (such as institut...

btools

Source code is shared in a public repository and is documented

url

Digital resources and their metadata should be retrievable throguh standardised communication protoc...

btools

Contact information is provided for the creator(s) of the tool and information describing how to cite the tool is provided

url

Reusability is not only a technical issue; data can be discovered, retrieved, and even be machine-re...

btools

The tool can be accessed programmatically through an API and follows community standards for open APIs

url

The availability of machine-readable metadata that describes a digital resource.

btools

A standardized ID or accession number is used to identify the dataset

url

The tool or the paper describing it contains a unique identifier. It is a necessary condition to una...

btools

Associated Digital Objects (20506)

CALQ

tool

compression of quality values of aligned sequencing data.

CalR

tool

A WebBased Analysis Tool for Indirect Calorimetry Experiments.

calypso

tool

a userfriendly webserver for mining and visualizing microbiomeenvironment interactions.

CAM

tool

an alignmentfree method to recover phylogenies using codon aversion motifs.

CAM-CM

tool

a signal deconvolution tool for in vivo dynamic contrastenhanced imaging of complex tissues.

CAMB

tool

Statistical mutation calling from sequenced overlapping DNA pools in experiments

CAMBerVis

tool

visualization software to support comparative analysis of multiple bacterial strains.

CAME

tool

identification of chromatin accessibility from nucleosome occupancy and methylome sequencing.

CaMELS

tool

In silico prediction of calmodulin binding proteins and their binding sites.

@MInter

tool

automated textmining of microbial interactions.

*omeSOM

tool

a software for clustering and visualization of transcriptional and metabolite data mined from inters...