Common Fund Tools Assessments

rubric

Evaluation of developed tools funded by the NIH Common Fund.

License: Free

Tags: Tools CF NIH

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Associated Metrics (9)

Licensing information is provided on the tools home page

url

A core aspect of data reusability is the ability to determine, unambiguously and with relative ease,...

Common-Fund Tools

The tool has a unique name and an informative description

url

Most people use a search engine to initiate a search for a particular digital resource of interest. ...

Common-Fund Tools

The tool can be freely downloaded or accessed from a webpage

url

The change to an identifier scheme will have widespread implications for resource lookup, linking, a...

Common-Fund Tools

Machine readable metadata

url

Metadata play an important role in enable users to find a resource of interest. Metadata may be inde...

Common-Fund Tools

Tutorials for the tool are available on the toolÂ’s homepage

url

Some digital resources comprise of sensitive data, and require additional measures (such as institut...

Common-Fund Tools

Source code is shared in a public repository and is documented

url

Digital resources and their metadata should be retrievable throguh standardised communication protoc...

Common-Fund Tools

Contact information is provided for the creator(s) of the tool and information describing how to cite the tool is provided

url

Reusability is not only a technical issue; data can be discovered, retrieved, and even be machine-re...

Common-Fund Tools

The tool can be accessed programmatically through an API and follows community standards for open APIs

url

The availability of machine-readable metadata that describes a digital resource.

Common-Fund Tools

A standardized ID or accession number is used to identify the dataset

url

The tool or the paper describing it contains a unique identifier. It is a necessary condition to una...

Common-Fund Tools

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Associated Digital Objects (262)

Coral

tool

Clear And Customizable Visualization Of Human Kinome Data

Illuminating the Druggable Genome

FeatSNP

tool

An Interactive Database For Brain-Specific Epigenetic Annotation Of Human Snps

4D Nucleome

ElemCor

tool

Accurate Data Analysis And Enrichment Calculation For High-Resolution Lc-Ms Stable Isotope Labeling ...

Metabolomics

The 3D Genome Browser

tool

A Web-Based Browser For Visualizing 3D Genome Organization And Long-Range Chromatin Interactions

4D Nucleome

sQTLseekeR

tool

Identification Of Genetic Variants Associated With Alternative Splicing Using Sqtlseeker

Genotype-Tissue Expression (GTEx)

ExoCarta

tool

A Web-Based Compendium Of Exosomal Cargo

Extracellular RNA Communication

sciclo

tool

Inferring Clonal Architecture And Tracking The Spatial And Temporal Patterns Of Tumor Evolution

Gabriella Miller Kids First

Bambus 2

tool

Scaffolding Metagenomes

Human Microbiome Project

IRBIS

tool

A Systematic Search For Conserved Complementarity

Genotype-Tissue Expression (GTEx)

UCHIME

tool

Improves Sensitivity And Speed Of Chimera Detection

Human Microbiome Project

wge

tool

A Crispr Database For Genome Engineering

Knockout Mouse Phenotyping

Create New Digital Object