Common Fund Tools Assessments

rubric

Evaluation of developed tools funded by the NIH Common Fund.

License: Free

Tags: Tools CF NIH

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Associated Metrics (9)

Licensing information is provided on the tools home page

url

A core aspect of data reusability is the ability to determine, unambiguously and with relative ease,...

Common-Fund Tools

The tool has a unique name and an informative description

url

Most people use a search engine to initiate a search for a particular digital resource of interest. ...

Common-Fund Tools

The tool can be freely downloaded or accessed from a webpage

url

The change to an identifier scheme will have widespread implications for resource lookup, linking, a...

Common-Fund Tools

Machine readable metadata

url

Metadata play an important role in enable users to find a resource of interest. Metadata may be inde...

Common-Fund Tools

Tutorials for the tool are available on the toolÂ’s homepage

url

Some digital resources comprise of sensitive data, and require additional measures (such as institut...

Common-Fund Tools

Source code is shared in a public repository and is documented

url

Digital resources and their metadata should be retrievable throguh standardised communication protoc...

Common-Fund Tools

Contact information is provided for the creator(s) of the tool and information describing how to cite the tool is provided

url

Reusability is not only a technical issue; data can be discovered, retrieved, and even be machine-re...

Common-Fund Tools

The tool can be accessed programmatically through an API and follows community standards for open APIs

url

The availability of machine-readable metadata that describes a digital resource.

Common-Fund Tools

A standardized ID or accession number is used to identify the dataset

url

The tool or the paper describing it contains a unique identifier. It is a necessary condition to una...

Common-Fund Tools

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Associated Digital Objects (522)

X13CMS

tool

Global Tracking Of Isotopic Labels In Untargeted Metabolomics

Metabolomics

DNAism

tool

Exploring Genomic Datasets On The Web With Horizon Charts

Gabriella Miller Kids First

Harmonizome

tool

A Collection Of Processed Datasets Gathered To Serve And Mine Knowledge About Genes And Proteins

Library of Integrated Network-Based Cellular Signatures (LINCS)

Datasets2Tools

tool

Repository And Search Engine For Bioinformatics Datasets Tools And Canned Analyses

Library of Integrated Network-Based Cellular Signatures (LINCS)

RDP

tool

Data And Tools For High Throughput Rrna Analysis

Human Microbiome Project

PIXiE

tool

An Algorithm For Automated Ion Mobility Arrival Time Extraction And Collision Cross Section Calculat...

Metabolomics

PSAP

tool

Genome-Wide Significance Testing Of Variation From Single Case Exomes

Genotype-Tissue Expression (GTEx)

Geneshot

tool

Search Engine For Ranking Genes From Arbitrary Text Queries

Library of Integrated Network-Based Cellular Signatures (LINCS)

Juicer

tool

Provides A Oneclick System For Analyzing Loopresolution Hic Experiments

4D Nucleome

Network2Canvas

tool

Network Visualization On A Canvas With Enrichment Analysis

Library of Integrated Network-Based Cellular Signatures (LINCS)

spa-assembler

tool

A Short Peptide Assembler For Metagenomic Data

Human Microbiome Project

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