Common Fund Tools Assessments

rubric

Evaluation of developed tools funded by the NIH Common Fund.

License: Free

Tags: Tools CF NIH

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Associated Metrics (9)

Licensing information is provided on the tools home page

url

A core aspect of data reusability is the ability to determine, unambiguously and with relative ease,...

Common-Fund Tools

The tool has a unique name and an informative description

url

Most people use a search engine to initiate a search for a particular digital resource of interest. ...

Common-Fund Tools

The tool can be freely downloaded or accessed from a webpage

url

The change to an identifier scheme will have widespread implications for resource lookup, linking, a...

Common-Fund Tools

Machine readable metadata

url

Metadata play an important role in enable users to find a resource of interest. Metadata may be inde...

Common-Fund Tools

Tutorials for the tool are available on the toolÂ’s homepage

url

Some digital resources comprise of sensitive data, and require additional measures (such as institut...

Common-Fund Tools

Source code is shared in a public repository and is documented

url

Digital resources and their metadata should be retrievable throguh standardised communication protoc...

Common-Fund Tools

Contact information is provided for the creator(s) of the tool and information describing how to cite the tool is provided

url

Reusability is not only a technical issue; data can be discovered, retrieved, and even be machine-re...

Common-Fund Tools

The tool can be accessed programmatically through an API and follows community standards for open APIs

url

The availability of machine-readable metadata that describes a digital resource.

Common-Fund Tools

A standardized ID or accession number is used to identify the dataset

url

The tool or the paper describing it contains a unique identifier. It is a necessary condition to una...

Common-Fund Tools

Associated Digital Objects (522)

SVScore

tool

An Impact Prediction Tool For Structural Variation

Gabriella Miller Kids First

COPDGene

tool

Examining The Role Of Unmeasured Confounding In Mediation Analysis With Genetic And Genomic Applicat...

Metabolomics

VarScan

tool

Variant Detection In Massively Parallel Sequencing Of Individual And Pooled Samples

Gabriella Miller Kids First

Crossbow

tool

Searching For Snps With Cloud Computing

Human Microbiome Project

CLUE

tool

L1000 Platform And The First 1,000,000 Profiles

Big Data to Knowledge

seeQTL

tool

A Searchable Database For Human Eqtls

Genotype-Tissue Expression (GTEx)

Pharos

tool

Collating Protein Information To Shed Light On The Druggable Genome

Illuminating the Druggable Genome

Oligotyping

tool

Differentiating Between Closely Related Microbial Taxa Using 16S Rrna Gene Data

Human Microbiome Project

Coral

tool

Clear And Customizable Visualization Of Human Kinome Data

Illuminating the Druggable Genome

FeatSNP

tool

An Interactive Database For Brain-Specific Epigenetic Annotation Of Human Snps

4D Nucleome

ElemCor

tool

Accurate Data Analysis And Enrichment Calculation For High-Resolution Lc-Ms Stable Isotope Labeling ...

Metabolomics