FAIRshake Testing

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This project contains arbitrary Digital Objects and is being used for testing purposes.

Tags: dcppc test

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Project Assessments (43)


Assessment Metrics
Target Rubric   SmartAPI fields described with an 'x-type' and 'x-description' Licensing information is provided on the tool’s homepage. The tool has a unique name and an informative description. The tool can be freely downloaded or accessed from a webpage. The tool utilizes a community-accepted ontology. Tutorials for the tool are available on the tool’s homepage. Source code is shared in a public repository and is documented. Previous versions of the tool are made available. Contact information is provided for the creator(s) of the tool and information describing how to cite the tool is provided. The tool can be accessed programmatically through an API and follows community standards for open APIs. Licensing information is provided on the tool’s homepage. A standardized ID or accession number is used to identify the dataset. The dataset is hosted in an established data repository, if a relevant repository exists. The dataset can be downloaded for free from the repository. Version information is provided for the dataset. Contact information is provided for the creator(s) of the dataset. Licensing information is provided on the dataset’s landing page. The structure of the repository permits efficient discovery of data and metadata by end users. The repository provides documentation for each resource to permit its complete and accurate citation. Version information is provided for each resource, where available. The metadata includes a title for the data resource The metadata specifies the creators The metadata includes a description of what the data is about no cost to access the data resource Machine-readable metadata that describes a digital resource is available. What is the nature and use limitations of the access protocol. Taxonomies in use are clearly defined and use community accepted terminology Globally unique identifier Persistent identifier Machine-readable metadata Standardized metadata Resource identifier in metadata Resource discovery through web search Open, Free, Standardized Access protocol Protocol to access restricted content Persistence of resource and metadata Resource uses formal language FAIR vocabulary Linked Digital resource license Metadata license Provenance scheme Certificate of compliance to community standard Update information is available Attribution information is available Terms of Service Tags All parameters have descriptions All paths have descriptions All responses have descriptions All paths have a unique operation ID
Harmonizome: Allen Brain Atlas Processed Dataset FAIRshake Semi Automation
  yes (1.00)     no (0.00)             no (0.00)   yesbut (0.75)   yesbut (0.75)   yes (1.00)   no (0.00) no (0.00)           no (0.00)                                 yes (1.00) yes (1.00)            
WikiPathways FAIRshake Semi Automation
  yesbut (0.75)     no (0.00)             yesbut (0.75)   no (0.00)   yes (1.00)   no (0.00)   no (0.00) yes (1.00)           yes (1.00)                                 no (0.00) yes (1.00)            
Harmonizome FAIRshake JSON-LD Rubric
                      no (0.00)   no (0.00)   no (0.00) no (0.00) yes (1.00) no (0.00) no (0.00) no (0.00)   no (0.00) no (0.00)                                                      
Harmonizome The FAIRshake tool rubric
    no (0.00) no (0.00) no (0.00) no (0.00) no (0.00) no (0.00) no (0.00) no (0.00) no (0.00)                                                                                
Harmonizome The FAIRshake tool rubric
    yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00)                                                                                
Harmonizome The FAIRshake tool rubric
    yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) yes (1.00) no (0.00) no (0.00) no (0.00)                                                                                
Harmonizome FAIRshake JSON-LD Rubric
                      no (0.00)   no (0.00)   no (0.00) no (0.00) no (0.00) no (0.00) no (0.00) no (0.00)   no (0.00) no (0.00)                                                      
Harmonizome: Biocarta Pathways FAIRshake JSON-LD Rubric
                      no (0.00)   no (0.00)   no (0.00) no (0.00) yes (1.00) yes (1.00) no (0.00) no (0.00)   yes (1.00) no (0.00)                                                      
CommonsShare-FairShake Integration Test on Helium FAIR metrics by fairmetrics.org
                                                      yes (1.00)                                              
GenBank FAIR metrics by fairmetrics.org
                                                      yes (1.00) no (0.00) yes (1.00)   no (0.00)   yes (1.00)                                  
GenBank FAIRshake Semi Automation
        no (0.00)             yes (1.00)   yes (1.00)           no (0.00) yes (1.00)           yes (1.00)                                                
Achilles Cell Line Gene Essentiality Profiles FAIRshake JSON-LD Rubric
                      no (0.00)   no (0.00)   no (0.00) no (0.00) yes (1.00) yes (1.00) no (0.00) no (0.00)   yes (1.00) no (0.00)                                                      
CCLE Cell Line Gene FAIRshake JSON-LD Rubric
                      no (0.00)   no (0.00)   no (0.00) no (0.00) no (0.00) yes (1.00) no (0.00) no (0.00)   no (0.00) no (0.00)                                                      
Harmonizome The SmartAPI Rubric
                                                                                                     
Achilles Cell Line Gene Essentiality Profiles FAIRshake JSON-LD Rubric
                                                                                                     
Harmonizome Achilles Cell Line Gene Essentiality Profiles FAIRshake JSON-LD Rubric
                                                                                                     
L1000 Dataset -small molecule, CRISPR perturbagens- LINCS Phase 2 (December 2015) FAIR metrics by fairmetrics.org
                                                      yes (1.00) yes (1.00) yes (1.00)                                          
Harmonizome FAIRshake Semi Automation
                      no (0.00)   yes (1.00)   no (0.00)   yes (1.00)   no (0.00) no (0.00)                                                            
Lifetime Accumulation of Microplastic in Children and Adults FAIR Metrics Group, fairmetrics.org original metrices
                                                                                                     
GenGIS FAIRshake Semi Automation
  yes (1.00)     yes (1.00)             yes (1.00)   yes (1.00)   yes (1.00)   no (0.00)   yes (1.00) yes (1.00)           yes (1.00)                                 yes (1.00) yes (1.00)            
CommonsShare-FairShake Integration Test on Helium FAIRshake Semi Automation
                                                                                                     
FAIRshake FAIRshake Semi Automation
                                                                                                     
Ag Data Commons FAIRshake Semi Automation
                                                                                                     
L1000 Dataset -small molecule, CRISPR perturbagens- LINCS Phase 2 (December 2015) FAIR metrics by fairmetrics.org
                                                                                                     
L1000 Dataset -small molecule, CRISPR perturbagens- LINCS Phase 2 (December 2015) FAIR metrics by fairmetrics.org
                                                      yes (1.00) yes (1.00) yes (1.00)