topmed-workflows/functional_equivalent_cwl

This workflow processes high-throughput sequencing data for downstream processing Requirements/expectations : - Human whole-genome pair-end sequencing data in unmapped BAM (uBAM) format - One or more read groups, one per uBAM file, all belonging to a single sample (SM) - Input uBAM files must additionally comply with the following requirements: - filenames all have the same suffix (we use ".unmapped.bam") - files must pass validation by ValidateSamFile - reads are provided in query-sorted order - all reads must have an RG tag - Reference genome must be Hg38 with ALT contigs

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Dockstore Automated Testing

A project to hold automated dockstore assessments

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FAIR metrics by fairmetrics.org

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