{"id":6269,"projects":[69],"description":"This workflow processes high-throughput sequencing data for downstream processing\n\nRequirements/expectations :\n- Human whole-genome pair-end sequencing data in unmapped BAM (uBAM) format\n- One or more read groups, one per uBAM file, all belonging to a single sample (SM)\n- Input uBAM files must additionally comply with the following requirements:\n  - filenames all have the same suffix (we use \".unmapped.bam\")\n  - files must pass validation by ValidateSamFile\n  - reads are provided in query-sorted order\n  - all reads must have an RG tag\n- Reference genome must be Hg38 with ALT contigs","image":"","tags":"","type":"","title":"topmed-workflows/functional_equivalent_cwl","url":"https://dockstore.org/api/api/ga4gh/v2/tools/%23workflow%2Fgithub.com%2FDataBiosphere%2Ftopmed-workflows%2Ffunctional_equivalent_cwl","authors":[1],"rubrics":[25]}