Omics Discovery Index

repo

The Omics Discovery Index (OmicsDI) provides dataset discovery across a heterogeneous, distributed group of Transcriptomics, Genomics, Proteomics and Metabolomics data resources spanning eight repositories in three continents and six organisations, including both open and controlled access data resources. The resource provides a short description of every dataset: accession, description, sample/data protocols biological evidences, publication, etc. Based on these metadata, OmicsDI provides extensive search capabilities, as well as identification of related datasets by metadata and data content where possible. In particular, OmicsDI identifies groups of related, multi-omics datasets across repositories by shared identifiers.

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Associated Projects (2)

FAIRness of Repositories and Datasets Listed on DataMed

project

FAIR evaluation of the repositories and datasets listed on the BioCADDIE DataMed Resource

DCPPC

FAIRness of FAIRsharing Databases

project

FAIR evaluation of the FAIRsharing databases

DCPPC

Associated Rubrics (2)

The FAIRshake repository rubric

repo

An initial rubric for asking questions about repositories.

test fairshake

FAIRSharing Rubric

any

dcppc